BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D07SP1|AL426514
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1181 1585 0.0
>3x_Contig1181
Length = 5187
Score = 1585 bits (799), Expect = 0.0
Identities = 800/801 (99%)
Strand = Plus / Plus
Query: 1 ctgatgctaagtacgctaagaaattgattatcgatttatccactttgacacattacgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 ctgatgctaagtacgctaagaaattgattatcgatttatccactttgacacattacgtca 2055
Query: 61 gtggaccaaattctgtgaaaatcagttccaccgtggatgatctttccaaacaggatatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 gtggaccaaattctgtgaaaatcagttccaccgtggatgatctttccaaacaggatatta 2115
Query: 121 aagtcaacaaagcttatctagtttcttgtaccaactccagattaagtgatttggaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 aagtcaacaaagcttatctagtttcttgtaccaactccagattaagtgatttggaaagtg 2175
Query: 181 cagcaaatgtggtttgtccaagtggtgacatcaaccaagttcacaaagtggcagaaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 cagcaaatgtggtttgtccaagtggtgacatcaaccaagttcacaaagtggcagaaggtg 2235
Query: 241 tggagttctacattgcggccgcctcttctgaagtggaagccgaagcaagagctactggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 tggagttctacattgcggccgcctcttctgaagtggaagccgaagcaagagctactggtg 2295
Query: 301 cttggcaaaagctattaaatgccggatgtttgcctcttcctgcaggttgtggaccatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 cttggcaaaagctattaaatgccggatgtttgcctcttcctgcaggttgtggaccatgta 2355
Query: 361 tcggtctcggaactggtttgttagaagagggccaagtcggtatttctgccactaatagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 tcggtctcggaactggtttgttagaagagggccaagtcggtatttctgccactaatagaa 2415
Query: 421 atttcaagggtagaatgggttctaaggatgcattagcatatctagcgtcaccatctgtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 atttcaagggtagaatgggttctaaggatgcattagcatatctagcgtcaccatctgtgg 2475
Query: 481 ttgctgcctccgctatcttgggtaagattggttccccagccgaagttttaggtacaaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 ttgctgcctccgctatcttgggtaagattggttccccagccgaagttttaggtacaaagg 2535
Query: 541 atccaaatttcacaggtgtcgtggctacggtagaagatgccccagctacttcagctgacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 atccaaatttcacaggtgtcgtggctacggtagaagatgccccagctacttcagctgacg 2595
Query: 601 gcaaggatgttgctgatgaaagtggtgcttctggtagcgtagaaattctagaaggtttcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 gcaaggatgttgctgatgaaagtggtgcttctggtagcgtagaaattctagaaggtttcc 2655
Query: 661 caagtgaaatttctggtgagttggtgctctgtgatgctgacaacatcaacactgatggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 caagtgaaatttctggtgagttggtgctctgtgatgctgacaacatcaacactgatggta 2715
Query: 721 tctacccaggtaagtwcacatatcaagatgatgttccaaaggaaactatggccaaggttt 780
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2716 tctacccaggtaagtacacatatcaagatgatgttccaaaggaaactatggccaaggttt 2775
Query: 781 gtatggaaaattacgatcctg 801
|||||||||||||||||||||
Sbjct: 2776 gtatggaaaattacgatcctg 2796
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5377
Number of Sequences: 1807
Number of extensions: 5377
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)